PLMD::CLTool Class Reference

This is the abstract base class to use for implementing new command line tool, within it there is information as to how to go about implemneting a new tool. More...

#include <CLTool.h>

Inheritance diagram for PLMD::CLTool:

Public Types
enum	{ unset, commandline, ifile }
	How is the input specified on the command line or in an input file. More...

Public Member Functions
	CLTool (const CLToolOptions &co)
virtual	~CLTool ()
	virtual destructor to allow inheritance More...
virtual std::string	description () const
	virtual function returning a one-line descriptor for the tool More...
const std::map< std::string, std::string > &	getInputData ()
virtual int	main (FILE *in, FILE *out, Communicator &pc)=0
	virtual function mapping to the specific main for each tool More...
bool	readInput (int argc, char **argv, FILE *in, FILE *out)
	Read the arguments from the command line. More...
void	setInputData (const std::map< std::string, std::string > &inputData)
	Set the input data: More...

Static Public Member Functions
static void	registerKeywords (Keywords &keys)
	Create the help keywords. More...

Public Attributes
enum PLMD::CLTool:: { ... }	inputdata
	How is the input specified on the command line or in an input file. More...

Protected Member Functions
void	error (const std::string &msg)
	Crash the command line tool with an error. More...
template<class T >
bool	parse (const std::string &key, T &t)
	Get the value of one of the command line arguments. More...
void	parseFlag (const std::string &key, bool &t)
	Find out whether one of the command line flags is present or not. More...
template<class T >
bool	parseVector (const std::string &key, std::vector< T > &t)

Private Member Functions
bool	readCommandLineArgs (int argc, char **argv, FILE *out)
	Read the arguments from the command line. More...
bool	readInputFile (int argc, char **argv, FILE *in, FILE *out)
	Read the arguments from an input file specified on the command line. More...
void	setRemainingToDefault (FILE *out)
	Set arguments from the default options provided to Keywords. More...

Private Attributes
std::map< std::string, std::string >	inputData
	The data read in from the command line stored in a map with the keywords. More...
const Keywords &	keywords
	The list of keywords for this CLTool. More...
const std::string	name
	The name of this command line tool. More...

Detailed Description

This is the abstract base class to use for implementing new command line tool, within it there is information as to how to go about implemneting a new tool.

Member Enumeration Documentation

anonymous enum

anonymous enum

How is the input specified on the command line or in an input file.

Enumerator
unset
commandline
ifile

Constructor & Destructor Documentation

CLTool()

PLMD::CLTool::CLTool ( const CLToolOptions &  co )

explicit

~CLTool()

virtual PLMD::CLTool::~CLTool ( )

inlinevirtual

virtual destructor to allow inheritance

Member Function Documentation

description()

virtual std::string PLMD::CLTool::description ( ) const

inlinevirtual

virtual function returning a one-line descriptor for the tool

Reimplemented in PLMD::cltools::Driver< real >, PLMD::cltools::CLToolSumHills, PLMD::ves::MD_LinearExpansionPES, PLMD::mapping::PathTools, PLMD::cltools::PdbRenumber, PLMD::cltools::PesMD, PLMD::cltools::SimpleMD, PLMD::cltools::Manual, PLMD::cltools::GenTemplate, PLMD::cltools::Completion, PLMD::cltools::kt, PLMD::cltools::Info, and PLMD::cltools::Driver< real >.

error()

void PLMD::CLTool::error ( const std::string &  msg )

protected

Crash the command line tool with an error.

getInputData()

const std::map<std::string,std::string>& PLMD::CLTool::getInputData ( )

inline

main()

virtual int PLMD::CLTool::main ( FILE *  in, FILE *  out, Communicator &  pc  )

pure virtual

virtual function mapping to the specific main for each tool

Implemented in PLMD::cltools::SimpleMD, PLMD::cltools::Driver< real >, PLMD::cltools::CLToolSumHills, PLMD::cltools::PesMD, PLMD::ves::MD_LinearExpansionPES, PLMD::mapping::PathTools, PLMD::cltools::PdbRenumber, PLMD::cltools::Manual, PLMD::cltools::GenTemplate, PLMD::cltools::Completion, PLMD::cltools::kt, and PLMD::cltools::Info.

parse()

template<class T >

bool PLMD::CLTool::parse ( const std::string &  key, T &  t  )

protected

Get the value of one of the command line arguments.

parseFlag()

void PLMD::CLTool::parseFlag ( const std::string &  key, bool &  t  )

protected

Find out whether one of the command line flags is present or not.

parseVector()

template<class T >

bool PLMD::CLTool::parseVector ( const std::string &  key, std::vector< T > &  t  )

protected

readCommandLineArgs()

bool PLMD::CLTool::readCommandLineArgs ( int  argc, char **  argv, FILE *  out  )

private

Read the arguments from the command line.

readInput()

bool PLMD::CLTool::readInput	(	int	argc,
		char **	argv,
		FILE *	in,
		FILE *	out
	)

Read the arguments from the command line.

readInputFile()

bool PLMD::CLTool::readInputFile ( int  argc, char **  argv, FILE *  in, FILE *  out  )

private

Read the arguments from an input file specified on the command line.

registerKeywords()

void PLMD::CLTool::registerKeywords ( Keywords &  keys )

static

Create the help keywords.

setInputData()

void PLMD::CLTool::setInputData ( const std::map< std::string, std::string > &  inputData )

inline

Set the input data:

setRemainingToDefault()

void PLMD::CLTool::setRemainingToDefault ( FILE *  out )

private

Set arguments from the default options provided to Keywords.

Member Data Documentation

inputData

std::map<std::string,std::string> PLMD::CLTool::inputData

private

The data read in from the command line stored in a map with the keywords.

inputdata

enum { ... } PLMD::CLTool::inputdata

How is the input specified on the command line or in an input file.

keywords

const Keywords& PLMD::CLTool::keywords

private

The list of keywords for this CLTool.

name

const std::string PLMD::CLTool::name

private

The name of this command line tool.

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The documentation for this class was generated from the following files:

• core/CLTool.h
• core/CLTool.cpp