action_pntr_ | PLMD::ves::CoeffsBase | private |
activate() | PLMD::ves::CoeffsBase | inline |
active | PLMD::ves::CoeffsBase | private |
args_ | PLMD::ves::CoeffsBase | private |
basisf_ | PLMD::ves::CoeffsBase | private |
checkCoeffsInfo(const std::string &, const std::string &, const unsigned int, const size_t, const std::vector< unsigned int > &) | PLMD::ves::CoeffsBase | |
coeffs_descriptions_ | PLMD::ves::CoeffsBase | private |
coeffs_type_ | PLMD::ves::CoeffsBase | private |
CoeffsBase() | PLMD::ves::CoeffsBase | explicit |
CoeffsBase(const std::string &, const std::vector< std::string > &, const std::vector< unsigned int > &, const bool use_iteration_counter=false) | PLMD::ves::CoeffsBase | explicit |
CoeffsBase(const std::string &, std::vector< Value *> &, std::vector< BasisFunctions *> &, const bool use_iteration_counter=false) | PLMD::ves::CoeffsBase | explicit |
CoeffsBase(const std::string &, std::vector< std::vector< Value *> > &, std::vector< std::vector< BasisFunctions *> > &, const bool use_iteration_counter=false, const std::string &multicoeffs_label="bias") | PLMD::ves::CoeffsBase | explicit |
CoeffsType enum name | PLMD::ves::CoeffsBase | private |
data_label_ | PLMD::ves::CoeffsBase | private |
deactivate() | PLMD::ves::CoeffsBase | inline |
dimension_labels_ | PLMD::ves::CoeffsBase | private |
field_iteration_ | PLMD::ves::CoeffsBase | private |
field_ncoeffs_total_ | PLMD::ves::CoeffsBase | private |
field_ndimensions_ | PLMD::ves::CoeffsBase | private |
field_shape_prefix_ | PLMD::ves::CoeffsBase | private |
field_time_ | PLMD::ves::CoeffsBase | private |
field_type_ | PLMD::ves::CoeffsBase | private |
Generic enum value | PLMD::ves::CoeffsBase | private |
getAllCoeffsDescriptions() const | PLMD::ves::CoeffsBase | inline |
getAllDimensionLabels() const | PLMD::ves::CoeffsBase | inline |
getCoeffDescription(const size_t index) const | PLMD::ves::CoeffsBase | inline |
getCoeffDescription(const std::vector< unsigned int > &) const | PLMD::ves::CoeffsBase | inline |
getCoeffsInfoFromFile(IFile &, const bool ignore_coeffs_info=false) | PLMD::ves::CoeffsBase | |
getDataLabel() const | PLMD::ves::CoeffsBase | inline |
getDimensionLabel(const unsigned int) const | PLMD::ves::CoeffsBase | inline |
getIndex(const std::vector< unsigned int > &) const | PLMD::ves::CoeffsBase | inline |
getIndices(const size_t) const | PLMD::ves::CoeffsBase | inline |
getIterationCounter() const | PLMD::ves::CoeffsBase | inline |
getIterationCounterAndTimeFromFile(IFile &) | PLMD::ves::CoeffsBase | protected |
getLabel() const | PLMD::ves::CoeffsBase | inline |
getOutputFmt() const | PLMD::ves::CoeffsBase | inline |
getPntrToAction() const | PLMD::ves::CoeffsBase | inline |
getPntrToVesBias() const | PLMD::ves::CoeffsBase | inline |
getTimeValue() const | PLMD::ves::CoeffsBase | inline |
getType() const | PLMD::ves::CoeffsBase | inline |
getTypeStr() const | PLMD::ves::CoeffsBase | |
indices_shape_ | PLMD::ves::CoeffsBase | private |
indicesExist(const std::vector< unsigned int > &) const | PLMD::ves::CoeffsBase | |
initializeIndices(const std::vector< unsigned int > &, const std::vector< std::string > &) | PLMD::ves::CoeffsBase | private |
isActive() const | PLMD::ves::CoeffsBase | inline |
isGenericCoeffs() const | PLMD::ves::CoeffsBase | inline |
isIterationCounterActive() const | PLMD::ves::CoeffsBase | inline |
isLinearBasisSetCoeffs() const | PLMD::ves::CoeffsBase | inline |
isMultiLinearBasisSetCoeffs() const | PLMD::ves::CoeffsBase | inline |
iteration_and_time_active_ | PLMD::ves::CoeffsBase | private |
iteration_opt | PLMD::ves::CoeffsBase | private |
label_ | PLMD::ves::CoeffsBase | private |
LinearBasisSet enum value | PLMD::ves::CoeffsBase | private |
linkAction(Action *) | PLMD::ves::CoeffsBase | |
linkVesBias(VesBias *) | PLMD::ves::CoeffsBase | |
multicoeffs_ | PLMD::ves::CoeffsBase | private |
multicoeffs_args_ | PLMD::ves::CoeffsBase | private |
multicoeffs_basisf_ | PLMD::ves::CoeffsBase | private |
MultiCoeffs_LinearBasisSet enum value | PLMD::ves::CoeffsBase | private |
ncoeffs_ | PLMD::ves::CoeffsBase | private |
ndimensions_ | PLMD::ves::CoeffsBase | private |
numberOfCoeffs() const | PLMD::ves::CoeffsBase | inline |
numberOfDimensions() const | PLMD::ves::CoeffsBase | inline |
output_fmt_ | PLMD::ves::CoeffsBase | private |
reinitializeIndices(const std::vector< unsigned int > &) | PLMD::ves::CoeffsBase | private |
resetOutputFmt() | PLMD::ves::CoeffsBase | inline |
resizeIndices(const std::vector< unsigned int > &) | PLMD::ves::CoeffsBase | protected |
resizeIndices(std::vector< BasisFunctions *> &) | PLMD::ves::CoeffsBase | protected |
sameShape(const CoeffsBase &) const | PLMD::ves::CoeffsBase | protected |
setAllCoeffsDescriptions(const std::string &description_prefix="C") | PLMD::ves::CoeffsBase | |
setAllCoeffsDescriptions(const std::vector< std::string > &) | PLMD::ves::CoeffsBase | |
setAllDimensionLabels(const std::string &) | PLMD::ves::CoeffsBase | |
setAllDimensionLabels(const std::vector< std::string > &) | PLMD::ves::CoeffsBase | |
setCoeffDescription(const size_t, const std::string &) | PLMD::ves::CoeffsBase | |
setCoeffDescription(const std::vector< unsigned int > &, const std::string &) | PLMD::ves::CoeffsBase | |
setDataLabel(const std::string &) | PLMD::ves::CoeffsBase | |
setDimensionLabel(const unsigned int, const std::string &) | PLMD::ves::CoeffsBase | |
setIterationCounter(const unsigned int) | PLMD::ves::CoeffsBase | inline |
setIterationCounterAndTime(const unsigned int, const double) | PLMD::ves::CoeffsBase | inline |
setLabel(const std::string &) | PLMD::ves::CoeffsBase | |
setLabels(const std::string &) | PLMD::ves::CoeffsBase | |
setLabels(const std::string &, const std::string &) | PLMD::ves::CoeffsBase | |
setOutputFmt(const std::string &ss) | PLMD::ves::CoeffsBase | inline |
setTime(const double) | PLMD::ves::CoeffsBase | inline |
setType(const CoeffsType coeffs_type) | PLMD::ves::CoeffsBase | |
setupBasisFunctionsInfo() | PLMD::ves::CoeffsBase | protected |
shapeOfIndices() const | PLMD::ves::CoeffsBase | inline |
shapeOfIndices(const unsigned int dim_index) const | PLMD::ves::CoeffsBase | inline |
time_md | PLMD::ves::CoeffsBase | private |
turnOffIterationCounter() | PLMD::ves::CoeffsBase | inline |
turnOnIterationCounter() | PLMD::ves::CoeffsBase | inline |
vesbias_pntr_ | PLMD::ves::CoeffsBase | private |
writeCoeffsInfoToFile(OFile &) const | PLMD::ves::CoeffsBase | |
writeIterationCounterAndTimeToFile(OFile &) const | PLMD::ves::CoeffsBase | protected |
writeTimeInfoToFile(OFile &, const double) const | PLMD::ves::CoeffsBase | |
~CoeffsBase() | PLMD::ves::CoeffsBase | |